Gene

cd9b

ID
ZDB-GENE-040426-2768
Name
CD9 molecule b
Symbol
cd9b Nomenclature History
Previous Names
  • cd9l
  • fb82b11
  • wu:fb82b11
  • zgc:56512
Type
protein_coding_gene
Location
Chr: 4 Mapping Details/Browsers
Description
Involved in posterior lateral line development. Predicted to localize to integral component of plasma membrane. Human ortholog(s) of this gene implicated in prostate adenocarcinoma. Is expressed in several structures, including EVL; epidermis; periderm; pronephric duct; and sensory system. Orthologous to human CD9 (CD9 molecule).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
9 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Gallardo et al., 2010
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cd9b Human Ortholog
No data available
Associated With cd9b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018503 Tetraspanin, conserved site
Domain IPR042055 CD9, extracellular domain
Family IPR000301 Tetraspanin, animals
Family IPR018499 Tetraspanin/Peripherin
Homologous_superfamily IPR008952 Tetraspanin, EC2 domain superfamily
Domain Details Per Protein
Protein Length CD9, extracellular domain Tetraspanin, animals Tetraspanin, conserved site Tetraspanin, EC2 domain superfamily Tetraspanin/Peripherin
UniProtKB:Q1L9G6 231
UniProtKB:Q7ZUH9 227
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cd9b-201 (1) Ensembl 859 nt
mRNA cd9b-202 (1) Ensembl 934 nt
mRNA cd9b-203 (1) Ensembl 1,125 nt
mRNA cd9b-204 (1) Ensembl 817 nt
mRNA cd9b-206 (1) Ensembl 739 nt
mRNA cd9b-207 (1) Ensembl 711 nt
ncRNA cd9b-005 (1) Ensembl 786 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations